Retrogenomics at Universität Münster
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Your Previous Runs/Views
2-way
2025/05/22 15:35
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Previous Requests
ID
The id of a previous request
Target Data
Upload file
Fasta file with repeats masked in lowercase letters (max 1GB). Bigger files please compress with: bzip, gzip, zip or compress before loading
or select clade and species
Select a clade...
Afrotheria
Aves/Neognathae
Ciliata/Paramecium
Dermoptera
Euarchontoglires
Human/Populations
Insecta/Diptera
Insecta/Hymenoptera
Insecta/Lepidoptera
Lagomorpha/Leporidae
Lagomorpha/Octonidae
Laurasiatheria/Caniformia/Ailuridae
Laurasiatheria/Caniformia/Canidae
Laurasiatheria/Caniformia/Mustelidae
Laurasiatheria/Caniformia/Odobenidae
Laurasiatheria/Caniformia/Otariidae
Laurasiatheria/Caniformia/Phocidae
Laurasiatheria/Caniformia/Ursidae
Laurasiatheria/Cetartiodactyla/Cetacea
Laurasiatheria/Cetartiodactyla/Ruminantia
Laurasiatheria/Cetartiodactyla/Suina
Laurasiatheria/Cetartiodactyla/Tylopoda
Laurasiatheria/Eulipotyphla
Laurasiatheria/Feliformia/Felidae
Laurasiatheria/Feliformia/Herpestidae
Laurasiatheria/Feliformia/Hyaenidae
Laurasiatheria/Megachiroptera/Pteropodidae
Laurasiatheria/Microchiroptera/Hipposideridae
Laurasiatheria/Microchiroptera/Mormoopidae
Laurasiatheria/Microchiroptera/Phyllostomidae
Laurasiatheria/Microchiroptera/Rhinolophidae
Laurasiatheria/Microchiroptera/Vespertilionidae
Laurasiatheria/Perissodactyla
Laurasiatheria/Pholidota
Laurasiatheria_bat1K
Marsupial/Intron-loss
Metatheria/Dasyuromorphia
Metatheria/Didelphimorphia
Metatheria/Diprotodontia
Metatheria/Microbiotheria
Monotremata
Mouse_strains
Priamtes/Rhesus8
Primates/11way
Primates/Apes
Primates/NWMs
Primates/OWMs
Primates/Strepsirrhines
Primates/Tarsier
Reptilia
Rodentia/Anomaluromorpha
Rodentia/Castorimorpha
Rodentia/Hystricomorpha/Bathyergidae
Rodentia/Hystricomorpha/Caviidae
Rodentia/Hystricomorpha/Chinchillidae
Rodentia/Hystricomorpha/Hydrochaeridae
Rodentia/Hystricomorpha/Octodontidae
Rodentia/Myomorpha/Cricetidae
Rodentia/Myomorpha/Dipodidae
Rodentia/Myomorpha/Muridae
Rodentia/Myomorpha/Platacanthomyidea
Rodentia/Myomorpha/Spalacidae
Rodentia/Sciuromorpha/Gliridae
Rodentia/Sciuromorpha/Sciuridae
Scandentia
Sp
Test/Diploid
Test/LAST/LASTZ
UCSC.Species
Xenatra/Cingulata
Xenatra/Pilosa
Select a species...
Query Data
Upload file
Fasta file with repeats masked in lowercase letters (max 1GB). Bigger files please compress with: bzip, gzip, zip or compress before loading
or select clade and species
Select a clade...
Afrotheria
Aves/Neognathae
Ciliata/Paramecium
Dermoptera
Euarchontoglires
Human/Populations
Human_Population_2025
Insecta/Diptera
Insecta/Hymenoptera
Insecta/Lepidoptera
Insecta/Odonata
Lagomorpha/Leporidae
Lagomorpha/Octonidae
Laurasiatheria/Caniformia/Ailuridae
Laurasiatheria/Caniformia/Canidae
Laurasiatheria/Caniformia/Mephitidae
Laurasiatheria/Caniformia/Mustelidae
Laurasiatheria/Caniformia/Odobenidae
Laurasiatheria/Caniformia/Otariidae
Laurasiatheria/Caniformia/Phocidae
Laurasiatheria/Caniformia/Ursidae
Laurasiatheria/Cetartiodactyla/Ancodonta
Laurasiatheria/Cetartiodactyla/Cetacea
Laurasiatheria/Cetartiodactyla/Ruminantia
Laurasiatheria/Cetartiodactyla/Suina
Laurasiatheria/Cetartiodactyla/Tylopoda
Laurasiatheria/Eulipotyphla
Laurasiatheria/Feliformia/Eupleridae
Laurasiatheria/Feliformia/Felidae
Laurasiatheria/Feliformia/Herpestidae
Laurasiatheria/Feliformia/Hyaenidae
Laurasiatheria/Feliformia/Viverridae
Laurasiatheria/Megachiroptera/Pteropodidae
Laurasiatheria/Microchiroptera/Craseonycteridae
Laurasiatheria/Microchiroptera/Hipposideridae
Laurasiatheria/Microchiroptera/Megadermatidae
Laurasiatheria/Microchiroptera/Molossidae
Laurasiatheria/Microchiroptera/Mormoopidae
Laurasiatheria/Microchiroptera/Noctilionidae
Laurasiatheria/Microchiroptera/Phyllostomidae
Laurasiatheria/Microchiroptera/Rhinolophidae
Laurasiatheria/Microchiroptera/Vespertilionidae
Laurasiatheria/Perissodactyla
Laurasiatheria/Pholidota
Laurasiatheria_bat1K
Marsupial/Intron-loss
Metatheria/Dasyuromorphia
Metatheria/Didelphimorphia
Metatheria/Diprotodontia
Metatheria/Microbiotheria
Monotremata
Mouse_strains
Mouse_strains_2024
NWM
Priamtes/Rhesus8
Primates/11way
Primates/Apes
Primates/NWMs
Primates/OWMs
Primates/Strepsirrhines
Primates/Tarsier
Reptilia
Rodentia/Anomaluromorpha
Rodentia/Castorimorpha
Rodentia/Hystricomorpha/Bathyergidae
Rodentia/Hystricomorpha/Capromyidae
Rodentia/Hystricomorpha/Caviidae
Rodentia/Hystricomorpha/Chinchillidae
Rodentia/Hystricomorpha/Ctenodactylidae
Rodentia/Hystricomorpha/Ctenomyidae
Rodentia/Hystricomorpha/Cuniculidae
Rodentia/Hystricomorpha/Dasyproctidae
Rodentia/Hystricomorpha/Dinomyidae
Rodentia/Hystricomorpha/Hydrochaeridae
Rodentia/Hystricomorpha/Hystricidae
Rodentia/Hystricomorpha/Myocastoridae
Rodentia/Hystricomorpha/Octodontidae
Rodentia/Hystricomorpha/Petromuridae
Rodentia/Hystricomorpha/Thryonomyidae
Rodentia/Myomorpha/Cricetidae
Rodentia/Myomorpha/Dipodidae
Rodentia/Myomorpha/Muridae
Rodentia/Myomorpha/Nesomyidae
Rodentia/Myomorpha/Platacanthomyidea
Rodentia/Myomorpha/Spalacidae
Rodentia/Sciuromorpha/Aplodontiidae
Rodentia/Sciuromorpha/Gliridae
Rodentia/Sciuromorpha/Sciuridae
Scandentia
Sp
Test/Diploid
Test/LAST/LASTZ
UCSC.Species
Xenatra/Cingulata
Xenatra/Pilosa
Select a species...
Additional Parameters
Title
Job title
Min Length
Min sequence length (minimum 50)
[+] Input Parameters (Click to see/change)
Min block length
Minimum block length
Min gap size
Minimum gap size
Max gap size
Maximum gap size
Max gap overlap
Maximum gap overlap
Align Method
LastZ
Last
The alignment method
Please note, depending on your data the run can take hours or even days!
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